BrainStars (B*)

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BrainStars marker genes (MD:high)

Genes whose levels in a specific CNS region are higher or lower than in others. (Help)
High regions Low regions
LS RS Cx motor Cx cingulate OB anterior OB posterior Pir Tu ventral S CA1 CA2/CA3 DG A posterior GP CPu lateral CPu medial MD VA/VL LG MG Hb M ME SCN MPA SO SPa ventral SPa dorsal DM VMH Arc PAG SC IC VTA SN Tg Pn MVe Cb vermis Cb lobe Cb nucleus spinal cord anterior spinal cord posterior
1 - 25 of 56 entries
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Probe set ID Symbol Name Fold Change [desc] Gene Category
1 1420337_at [new page][PP page] Gbx2 gastrulation brain homeobox 2 17.0058 TF Ng Hox
2 1437231_at [new page][PP page] Slitrk6 SLIT and NTRK-like family, member 6 15.1461 Ng
3 1437156_at [new page][PP page] Necab1 N-terminal EF-hand calcium binding protein 1 8.69816
4 1426338_a_at [new page][PP page] Ntng1 netrin G1 8.60144 EM Ng AG
5 1453486_a_at [new page][PP page] Scube2 signal peptide, CUB domain, EGF-like 2 6.3074
6 1415948_at [new page][PP page] Creg1 cellular repressor of E1A-stimulated genes 1 4.09304
7 1415947_at [new page][PP page] Pappa2 pappalysin 2 4.0604
8 1436204_at [new page][PP page] 1110059G02Rik RIKEN cDNA 1110059G02 gene 3.77509
9 1417607_at [new page][PP page] Cox6a2 cytochrome c oxidase, subunit VI a, polypeptide 2 3.76241
10 1454995_at [new page][PP page] 3.35877
11 1453177_at [new page][PP page] Snx31 sorting nexin 31 3.32148
12 1426922_s_at [new page][PP page] Agfg1 ArfGAP with FG repeats 1 3.00517
13 1457429_s_at [new page][PP page] Gm106 gene model 106, (NCBI) 3.00216
14 1432509_at [new page][PP page] 5033430I15Rik RIKEN cDNA 5033430I15 gene 2.80936
15 1440162_x_at [new page][PP page] A630043P06 hypothetical protein A630043P06 2.80684
16 1426923_at [new page][PP page] Agfg1 ArfGAP with FG repeats 1 2.72983
17 1435987_x_at [new page][PP page] 1110059G02Rik RIKEN cDNA 1110059G02 gene 2.70186
18 1451782_a_at [new page][PP page] Slc29a1 solute carrier family 29 (nucleoside transporters), member 1 2.68818 SLC
19 1429298_at [new page][PP page] Ddah1 dimethylarginine dimethylaminohydrolase 1 2.63797
20 1457633_x_at [new page][PP page] Cox6a2 cytochrome c oxidase, subunit VI a, polypeptide 2 2.63541
21 1422342_at [new page][PP page] Nmbr neuromedin B receptor 2.50585 GPCR NH/NT
22 1452238_at [new page][PP page] Agfg1 ArfGAP with FG repeats 1 2.47083
23 1448837_at [new page][PP page] Vil1 villin 1 2.35445
24 1436847_s_at [new page][PP page] Cdca8 cell division cycle associated 8 2.25461
25 1430951_at [new page][PP page] 2810011L19Rik RIKEN cDNA 2810011L19 gene 2.22321
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
Copyright © 2009 RIKEN Center for developmental Biology.